.gitignore

+### Eclipse ###
+.metadata
+bin/
+tmp/
+*.tmp
+*.bak
+*.swp
+*~.nib
+local.properties
+.settings/
+.loadpath
+.recommenders
+
+# External tool builders
+.externalToolBuilders/
+
+# Locally stored "Eclipse launch configurations"
+*.launch
+
+# PyDev specific (Python IDE for Eclipse)
+*.pydevproject
+
+# CDT-specific (C/C++ Development Tooling)
+.cproject
+
+# CDT- autotools
+.autotools
+
+# Java annotation processor (APT)
+.factorypath
+
+# PDT-specific (PHP Development Tools)
+.buildpath
+
+# sbteclipse plugin
+.target
+
+# Tern plugin
+.tern-project
+
+# TeXlipse plugin
+.texlipse
+
+# STS (Spring Tool Suite)
 .springBeans
+
+# Code Recommenders
+.recommenders/
+
+# Annotation Processing
+.apt_generated/
+
+# Scala IDE specific (Scala & Java development for Eclipse)
+.cache-main
+.scala_dependencies
+.worksheet
+
+### Eclipse Patch ###
+# Eclipse Core
+.project
+
+# JDT-specific (Eclipse Java Development Tools)
+.classpath
+
+# Annotation Processing
+.apt_generated
+
+.sts4-cache/
+
+### Java ###
+# Compiled class file
 *.class
 
+# Log file
+*.log
+
+# BlueJ files
+*.ctxt
+
 # Mobile Tools for Java (J2ME)
 .mtj.tmp/
 
 # Package Files #
 *.jar
 *.war
+*.nar
 *.ear
+*.zip
+*.tar.gz
+*.rar
 
 # virtual machine crash logs, see http://www.java.com/en/download/help/error_hotspot.xml
 hs_err_pid*
-**/target/
 
-.project
-.settings
-.classpath
+### Java-Web ###
+## ignoring target file
+target/
+
+### Gradle ###
+.gradle
+build/
+
+# Ignore Gradle GUI config
+gradle-app.setting
+
+# Avoid ignoring Gradle wrapper jar file (.jar files are usually ignored)
+!gradle-wrapper.jar
+
+# Cache of project
+.gradletasknamecache
 
+# # Work around https://youtrack.jetbrains.com/issue/IDEA-116898
+# gradle/wrapper/gradle-wrapper.properties
 
-docs/_build
-docs/venv
+### Gradle Patch ###
+**/build/

.gitlab-ci.yml

-image: maven:latest
+image: java:8-jdk
 
 variables:
-  MAVEN_CLI_OPTS: "--batch-mode"
-  GIT_SUBMODULE_STRATEGY: recursive
+  GRADLE_OPTS: "-Dorg.gradle.daemon=false"
+  NEXUS_CREDENTIALS: "-Pnexususer=$NEXUS_REPO_USER -Pnexuspass=$NEXUS_REPO_PASS"
 
 before_script:
-  - VERSION=$(mvn help:evaluate -Dexpression=project.version -q -DforceStdout)
-  - ARTIFACT=$(mvn help:evaluate -Dexpression=project.artifactId -q -DforceStdout)
-
+  - export GRADLE_USER_HOME=`pwd`/.gradle
+  - ./gradlew wrapper --gradle-version=5.6.4 --distribution-type=bin
+
+cache:
+  paths:
+    - .gradle/wrapper
+    - .gradle/caches
+
+stages:
+  - build
+  - test
+  - deploy
+  
 build:
   stage: build
-  script:
-    - mvn $MAVEN_CLI_OPTS compile
+  script: ./gradlew assemble
 
 test:
   stage: test
-  script:
-    - mvn $MAVEN_CLI_OPTS test
+  script: ./gradlew test
    
 deploy:
   stage: deploy
   script:
-    - |
-      if [[ $VERSION = *"SNAPSHOT" || $VERSION = *"RELEASE" ]]; then
-        echo "Building Debian package for $VERSION"
-        mvn $MAVEN_CLI_OPTS -U -Pdariah.deb -Dmaven.test.failure.ignore package
-
-        ~/scripts/push_deb_packages.sh ./target/
-
-      fi
+    - ./gradlew publish -x :dme-docs:publish $NEXUS_CREDENTIALS
   only:
     - master
 
 docs:
   stage: deploy
   script:
-    - |
-      if [[ $VERSION = *"SNAPSHOT" || $VERSION = *"RELEASE" ]]; then
-        echo "Building documentation for $ARTIFACT $VERSION"
-        cd docs
-
-        echo "-- Setting up Virtualenv"
-        virtualenv venv
-        pwd
-        . venv/bin/activate
-
-        echo "-- Installing requirements"
-        pip install -r requirements.txt
-
-        echo "-- Building HTML version within $(pwd)"
-        make clean html
-
-        echo "-- Creating package"
-        fpm -t deb -a noarch -s dir --name dme-doc \
-                              --description='DARIAH-DE DME Documentation' \
-                              --maintainer='DARIAH-DE <info@de.dariah.eu>' \
-                              --vendor='DARIAH-DE' \
-                              --url='https://dme.de.dariah.eu' \
-                              --version $VERSION \
-                              -x ".git**" \
-                              -x "**/.git**" \
-                              -x "**/.hg**" \
-                              -x "**/.svn**" \
-                              -x ".buildinfo" \
-                              -x "**/*.deb" \
-                              --prefix /var/www/doc/dme \
-                              -C _build/html .
-        
-        ~/scripts/push_deb_packages.sh ./
-        
-      fi
+    - ./gradlew :dme-docs:publish $NEXUS_CREDENTIALS 
   only:
     - master
-    - docs
\ No newline at end of file
+    - docs

build.gradle

+buildscript {
+    repositories {
+        //maven { url 'https://repo.spring.io/plugins-snapshot' }
+        maven { url 'https://plugins.gradle.org/m2/' }
+    }
+    dependencies {
+        //classpath 'io.spring.gradle:dependency-management-plugin'
+        classpath 'com.netflix.nebula:gradle-ospackage-plugin'
+    }
+}
+
+plugins {
+    id 'war'
+    //id 'io.spring.dependency-management' version '1.0.8.RELEASE'
+    id 'maven-publish'
+    id 'nebula.ospackage' version '8.0.3'
+}
+
+allprojects {
+    group = 'de.unibamberg.minf'
+    version = '3.6.0-SNAPSHOOT'
+    description = 'DARIAH-DE Data Modeling Environment'
+
+    ext {
+        mavenRepo     = 'https://minfba.de.dariah.eu/nexus/repository/minfba-central/'
+        releasesRepo  = "https://minfba.de.dariah.eu/nexus/repository/minfba-releases/"
+        snapshotsRepo = "https://minfba.de.dariah.eu/nexus/repository/minfba-snapshots/"
+        aptRepo       = 'https://minfba.de.dariah.eu/nexus/repository/minfba-apt/'
+        yumRepo       = 'https://minfba.de.dariah.eu/nexus/repository/minfba-yum/'
+        
+        repoUser = project.hasProperty('nexususer') ? project.getProperty('nexususer') : '?';
+        repoPass = project.hasProperty('nexuspass') ? project.getProperty('nexuspass') : ''
+    }
+}
+
+repositories {
+    mavenLocal()
+    maven {
+        url = mavenRepo
+    }
+}
+
+ext {
+    coreVersion = "5.3.0-SNAPSHOT"
+    gtfVersion = "1.6.0-SNAPSHOT"
+    processingVersion = "3.8.0-SNAPSHOT"
+
+    // Filled dynamically by packaging tasks
+    debFile = ""
+    rpmFile = ""
+}
+
+dependencies {
+    compile "de.unibamberg.minf.core:core-metamodel:$coreVersion"
+    compile "de.unibamberg.minf.core:core-web:$coreVersion"
+    compile "de.unibamberg.minf.core:core-util:$coreVersion"
+    compile "de.unibamberg.minf.gtf:gtf-base:$gtfVersion"
+    compile "de.unibamberg.minf.gtf:gtf-core:$gtfVersion"
+    compile "de.unibamberg.minf.gtf:gtf-extension-file:$gtfVersion"
+    compile "de.unibamberg.minf.gtf:gtf-extension-wiki:$gtfVersion"
+    compile "de.unibamberg.minf.gtf:gtf-extension-geo:$gtfVersion"
+    compile "de.unibamberg.minf.gtf:gtf-extension-nlp:$gtfVersion"
+    compile "de.unibamberg.minf.gtf:gtf-extension-vocabulary:$gtfVersion"
+    compile "de.unibamberg.minf.gtf:gtf-extension-dai:$gtfVersion"
+    compile "de.unibamberg.minf.processing:processing:$processingVersion"
+    compile "eu.dariah.de.minfba.core-legacy:core-metamodel:3.3.1"
+    compile "org.springframework:spring-context:4.3.6.RELEASE"
+    compile "org.springframework:spring-core:4.3.6.RELEASE"
+    compile "org.springframework:spring-beans:4.3.6.RELEASE"
+    compile "org.springframework:spring-webmvc:4.3.6.RELEASE"
+    compile "org.springframework:spring-web:4.3.6.RELEASE"
+    compile "org.apache.httpcomponents:httpclient:4.3.3"
+    compile "org.apache.httpcomponents:httpcore:4.3.2"
+    compile "org.springframework.security:spring-security-core:4.2.1.RELEASE"
+    compile "org.springframework.security:spring-security-web:4.2.1.RELEASE"
+    compile "org.springframework.security:spring-security-config:4.2.1.RELEASE"
+    compile "eu.dariah.de:dariahsp-core:1.3.0-SNAPSHOT"
+    compile "org.springframework.data:spring-data-mongodb:1.10.6.RELEASE"
+    compile "org.mongodb:mongo-java-driver:3.4.2"
+    compile "org.hibernate:hibernate-validator:5.2.2.Final"
+    compile "xerces:xercesImpl:2.12.0"
+    compile "org.apache.tiles:tiles-core:3.0.7"
+    compile "org.apache.tiles:tiles-jsp:3.0.7"
+    compile "org.apache.tiles:tiles-api:3.0.7"
+    compile "org.slf4j:slf4j-api:1.7.22"
+    compile "ch.qos.logback:logback-core:1.1.3"
+    compile "ch.qos.logback:logback-classic:1.1.3"
+    compile "javax.servlet:jstl:1.2"
+    compile "com.fasterxml.jackson.core:jackson-databind:2.9.6"
+    compile "com.fasterxml.jackson.datatype:jackson-datatype-joda:2.9.6"
+    compile "com.fasterxml.jackson.core:jackson-annotations:2.9.6"
+    compile "commons-fileupload:commons-fileupload:1.3.1"
+    compile "joda-time:joda-time:2.8.2"
+    compile "joda-time:joda-time-jsptags:1.1.1"
+    runtime "org.slf4j:jcl-over-slf4j:1.7.22"
+    runtime "org.slf4j:log4j-over-slf4j:1.7.22"
+    testCompile "org.springframework:spring-test:4.3.6.RELEASE"
+    testCompile "junit:junit:4.12"
+    testCompile "org.mockito:mockito-all:1.10.19"
+    compileOnly "javax.servlet:javax.servlet-api:3.1.0"
+    compileOnly "javax.servlet.jsp:jsp-api:2.2"
+}
+
+java {
+    sourceCompatibility = JavaVersion.VERSION_1_8
+}
+
+tasks.withType(JavaCompile) {
+    options.encoding = 'UTF-8'
+}
+
+task sourcesJar(type: Jar, dependsOn: classes) {
+    classifier = 'sources'
+    from sourceSets.main.allSource
+}
+
+task javadocJar(type: Jar, dependsOn: javadoc) {
+    classifier = 'javadoc'
+    from javadoc.destinationDir
+}
+
+artifacts {
+    archives sourcesJar
+    archives javadocJar
+}
+
+tasks.withType(Deb) {
+    dependsOn(classes)
+    doLast {
+        project.debFile = archiveName;
+    }
+}
+
+tasks.withType(Rpm) {
+    dependsOn(classes)
+    doLast {
+        project.rpmFile = archiveName;
+    }
+}
+
+ospackage {
+    os = LINUX
+    arch = 'noarch'
+    packageName "dariah-$project.name"
+    replaces "$project.name"
+    maintainer 'info@de.dariah.eu'
+    requires('openjdk-8-jdk').or('openjdk-11-jdk')
+    signingKeyId('CB012F105B632B46C2A7B4918FC46DAC1BC3E238')
+
+    into "var/dfa/webapps/$project.name/"
+
+    from(configurations.runtime) {
+        into "WEB-INF/lib"
+    }
+
+    from("$buildDir/classes/java/main") {
+        into "WEB-INF/classes"
+    }
+
+    from ("src/main/resources") {
+        into "WEB-INF/classes"
+    }
+
+    from ("src/main/webapp/WEB-INF") {
+        into "WEB-INF"
+    }
+
+    from ("src/main/webapp/resources") {
+        into "resources"
+    }
+
+    from ("src/main/webapp/themes") {
+        into "themes"
+    }
+
+    from ("src/main/webapp/META-INF") {
+        into "META-INF"
+    }
+}
+
+publishing {
+    publications {
+        maven(MavenPublication) {
+            from(components.web)
+            artifact(sourcesJar) {}
+            artifact(javadocJar) {}
+            pom {
+                name = 'DARIAH-DE Data Modeling Environment'
+                url = 'https://gitlab.rz.uni-bamberg.de/dariah/dme'
+                licenses {
+                    license {
+                        name = 'The Apache License, Version 2.0'
+                        url = 'http://www.apache.org/licenses/LICENSE-2.0.txt'
+                    }
+                }
+                developers {
+                    developer {
+                        id = 'tgradl'
+                        name = 'Tobias Gradl'
+                        email = 'tobias.gradl@uni-bamberg.de'
+                    }
+                }
+                scm {
+                    connection = 'scm:git:git://gitlab.rz.uni-bamberg.de/dariah/dme.git'
+                    developerConnection = 'scm:git:ssh://gitlab.rz.uni-bamberg.de/dariah/dme.git'
+                    url = 'https://gitlab.rz.uni-bamberg.de/dariah/dme'
+                }
+                issueManagement {
+                    system = 'GitLab'
+                    url = 'https://gitlab.rz.uni-bamberg.de/dariah/dme/issues'
+                }
+            }
+        }
+    }
+    repositories {
+        maven {            
+            if (version.endsWith('SNAPSHOT') || version.endsWith('RELEASE')) {
+                credentials {
+                    username repoUser
+                    password repoPass
+                }
+                url = version.endsWith('SNAPSHOT') ? snapshotsRepo : releasesRepo
+            } else {
+                // Have a local test repo under buildDir to be able to test publish but only actually do publish when the version ending matches
+                url = "$buildDir/repo/"
+            }
+        }
+    }
+}
+
+task publishDebPackage {
+    dependsOn buildDeb
+    def distroPath = "$buildDir/distributions/"
+    doLast {
+        if (version.endsWith('SNAPSHOT') || version.endsWith('RELEASE')) {
+            println "Publishing Debian package $debFile as user $repoUser";
+            exec {
+                executable "curl"
+                args "-f", "-u", "$repoUser:$repoPass", "-H", "Content-Type: multipart/form-data", "--data-binary", "@$distroPath$debFile", "$aptRepo";
+            }
+        }
+    }
+}
+
+task publishRpmPackage {
+    dependsOn buildRpm
+    def distroPath = "$buildDir/distributions/"
+    doLast {
+        if (version.endsWith('SNAPSHOT') || version.endsWith('RELEASE')) {
+            println "Publishing Rpm package $rpmFile as user $repoUser";
+            exec {
+                executable "curl"
+                args "-f", "-u", "$repoUser:$repoPass", "--upload-file", "$distroPath$rpmFile", "$yumRepo/dariah/${project.name}/${project.version}/$rpmFile";
+            }
+        }
+    }
+}
+
+publish.finalizedBy publishDebPackage
+publish.finalizedBy publishRpmPackage
\ No newline at end of file

docs/Makefile

-# Makefile for Sphinx documentation
-#
-
-# You can set these variables from the command line.
-SPHINXOPTS    =
-SPHINXBUILD   = sphinx-build
-PAPER         =
-BUILDDIR      = _build
-
-# User-friendly check for sphinx-build
-ifeq ($(shell which $(SPHINXBUILD) >/dev/null 2>&1; echo $$?), 1)
-$(error The '$(SPHINXBUILD)' command was not found. Make sure you have Sphinx installed, then set the SPHINXBUILD environment variable to point to the full path of the '$(SPHINXBUILD)' executable. Alternatively you can add the directory with the executable to your PATH. If you don't have Sphinx installed, grab it from http://sphinx-doc.org/)
-endif
-
-# Internal variables.
-PAPEROPT_a4     = -D latex_paper_size=a4
-PAPEROPT_letter = -D latex_paper_size=letter
-ALLSPHINXOPTS   = -d $(BUILDDIR)/doctrees $(PAPEROPT_$(PAPER)) $(SPHINXOPTS) .
-# the i18n builder cannot share the environment and doctrees with the others
-I18NSPHINXOPTS  = $(PAPEROPT_$(PAPER)) $(SPHINXOPTS) .
-
-.PHONY: help clean html dirhtml singlehtml pickle json htmlhelp qthelp devhelp epub latex latexpdf text man changes linkcheck doctest coverage gettext
-
-help:
-	@echo "Please use \`make <target>' where <target> is one of"
-	@echo "  html       to make standalone HTML files"
-	@echo "  dirhtml    to make HTML files named index.html in directories"
-	@echo "  singlehtml to make a single large HTML file"
-	@echo "  pickle     to make pickle files"
-	@echo "  json       to make JSON files"
-	@echo "  htmlhelp   to make HTML files and a HTML help project"
-	@echo "  qthelp     to make HTML files and a qthelp project"
-	@echo "  applehelp  to make an Apple Help Book"
-	@echo "  devhelp    to make HTML files and a Devhelp project"
-	@echo "  epub       to make an epub"
-	@echo "  latex      to make LaTeX files, you can set PAPER=a4 or PAPER=letter"
-	@echo "  latexpdf   to make LaTeX files and run them through pdflatex"
-	@echo "  latexpdfja to make LaTeX files and run them through platex/dvipdfmx"
-	@echo "  text       to make text files"
-	@echo "  man        to make manual pages"
-	@echo "  texinfo    to make Texinfo files"
-	@echo "  info       to make Texinfo files and run them through makeinfo"
-	@echo "  gettext    to make PO message catalogs"
-	@echo "  changes    to make an overview of all changed/added/deprecated items"
-	@echo "  xml        to make Docutils-native XML files"
-	@echo "  pseudoxml  to make pseudoxml-XML files for display purposes"
-	@echo "  linkcheck  to check all external links for integrity"
-	@echo "  doctest    to run all doctests embedded in the documentation (if enabled)"
-	@echo "  coverage   to run coverage check of the documentation (if enabled)"
-
-clean:
-	rm -rf $(BUILDDIR)/*
-
-html:
-	$(SPHINXBUILD) -b html $(ALLSPHINXOPTS) $(BUILDDIR)/html
-	@echo
-	@echo "Build finished. The HTML pages are in $(BUILDDIR)/html."
-
-dirhtml:
-	$(SPHINXBUILD) -b dirhtml $(ALLSPHINXOPTS) $(BUILDDIR)/dirhtml
-	@echo
-	@echo "Build finished. The HTML pages are in $(BUILDDIR)/dirhtml."
-
-singlehtml:
-	$(SPHINXBUILD) -b singlehtml $(ALLSPHINXOPTS) $(BUILDDIR)/singlehtml
-	@echo
-	@echo "Build finished. The HTML page is in $(BUILDDIR)/singlehtml."
-
-pickle:
-	$(SPHINXBUILD) -b pickle $(ALLSPHINXOPTS) $(BUILDDIR)/pickle
-	@echo
-	@echo "Build finished; now you can process the pickle files."
-
-json:
-	$(SPHINXBUILD) -b json $(ALLSPHINXOPTS) $(BUILDDIR)/json
-	@echo
-	@echo "Build finished; now you can process the JSON files."
-
-htmlhelp:
-	$(SPHINXBUILD) -b htmlhelp $(ALLSPHINXOPTS) $(BUILDDIR)/htmlhelp
-	@echo
-	@echo "Build finished; now you can run HTML Help Workshop with the" \
-	      ".hhp project file in $(BUILDDIR)/htmlhelp."
-
-qthelp:
-	$(SPHINXBUILD) -b qthelp $(ALLSPHINXOPTS) $(BUILDDIR)/qthelp
-	@echo
-	@echo "Build finished; now you can run "qcollectiongenerator" with the" \
-	      ".qhcp project file in $(BUILDDIR)/qthelp, like this:"
-	@echo "# qcollectiongenerator $(BUILDDIR)/qthelp/tgimport.qhcp"
-	@echo "To view the help file:"
-	@echo "# assistant -collectionFile $(BUILDDIR)/qthelp/tgimport.qhc"
-
-applehelp:
-	$(SPHINXBUILD) -b applehelp $(ALLSPHINXOPTS) $(BUILDDIR)/applehelp
-	@echo
-	@echo "Build finished. The help book is in $(BUILDDIR)/applehelp."
-	@echo "N.B. You won't be able to view it unless you put it in" \
-	      "~/Library/Documentation/Help or install it in your application" \
-	      "bundle."
-
-devhelp:
-	$(SPHINXBUILD) -b devhelp $(ALLSPHINXOPTS) $(BUILDDIR)/devhelp
-	@echo
-	@echo "Build finished."
-	@echo "To view the help file:"
-	@echo "# mkdir -p $$HOME/.local/share/devhelp/tgimport"
-	@echo "# ln -s $(BUILDDIR)/devhelp $$HOME/.local/share/devhelp/tgimport"
-	@echo "# devhelp"
-
-epub:
-	$(SPHINXBUILD) -b epub $(ALLSPHINXOPTS) $(BUILDDIR)/epub
-	@echo
-	@echo "Build finished. The epub file is in $(BUILDDIR)/epub."
-
-latex:
-	$(SPHINXBUILD) -b latex $(ALLSPHINXOPTS) $(BUILDDIR)/latex
-	@echo
-	@echo "Build finished; the LaTeX files are in $(BUILDDIR)/latex."
-	@echo "Run \`make' in that directory to run these through (pdf)latex" \
-	      "(use \`make latexpdf' here to do that automatically)."
-
-latexpdf:
-	$(SPHINXBUILD) -b latex $(ALLSPHINXOPTS) $(BUILDDIR)/latex
-	@echo "Running LaTeX files through pdflatex..."
-	$(MAKE) -C $(BUILDDIR)/latex all-pdf
-	@echo "pdflatex finished; the PDF files are in $(BUILDDIR)/latex."
-
-latexpdfja:
-	$(SPHINXBUILD) -b latex $(ALLSPHINXOPTS) $(BUILDDIR)/latex
-	@echo "Running LaTeX files through platex and dvipdfmx..."
-	$(MAKE) -C $(BUILDDIR)/latex all-pdf-ja
-	@echo "pdflatex finished; the PDF files are in $(BUILDDIR)/latex."
-
-text:
-	$(SPHINXBUILD) -b text $(ALLSPHINXOPTS) $(BUILDDIR)/text
-	@echo
-	@echo "Build finished. The text files are in $(BUILDDIR)/text."
-
-man:
-	$(SPHINXBUILD) -b man $(ALLSPHINXOPTS) $(BUILDDIR)/man
-	@echo
-	@echo "Build finished. The manual pages are in $(BUILDDIR)/man."
-
-texinfo:
-	$(SPHINXBUILD) -b texinfo $(ALLSPHINXOPTS) $(BUILDDIR)/texinfo
-	@echo
-	@echo "Build finished. The Texinfo files are in $(BUILDDIR)/texinfo."
-	@echo "Run \`make' in that directory to run these through makeinfo" \
-	      "(use \`make info' here to do that automatically)."
-
-info:
-	$(SPHINXBUILD) -b texinfo $(ALLSPHINXOPTS) $(BUILDDIR)/texinfo
-	@echo "Running Texinfo files through makeinfo..."
-	make -C $(BUILDDIR)/texinfo info
-	@echo "makeinfo finished; the Info files are in $(BUILDDIR)/texinfo."
-
-gettext:
-	$(SPHINXBUILD) -b gettext $(I18NSPHINXOPTS) $(BUILDDIR)/locale
-	@echo
-	@echo "Build finished. The message catalogs are in $(BUILDDIR)/locale."
-
-changes:
-	$(SPHINXBUILD) -b changes $(ALLSPHINXOPTS) $(BUILDDIR)/changes
-	@echo
-	@echo "The overview file is in $(BUILDDIR)/changes."
-
-linkcheck:
-	$(SPHINXBUILD) -b linkcheck $(ALLSPHINXOPTS) $(BUILDDIR)/linkcheck
-	@echo
-	@echo "Link check complete; look for any errors in the above output " \
-	      "or in $(BUILDDIR)/linkcheck/output.txt."
-
-doctest:
-	$(SPHINXBUILD) -b doctest $(ALLSPHINXOPTS) $(BUILDDIR)/doctest
-	@echo "Testing of doctests in the sources finished, look at the " \
-	      "results in $(BUILDDIR)/doctest/output.txt."
-
-coverage:
-	$(SPHINXBUILD) -b coverage $(ALLSPHINXOPTS) $(BUILDDIR)/coverage
-	@echo "Testing of coverage in the sources finished, look at the " \
-	      "results in $(BUILDDIR)/coverage/python.txt."
-
-xml:
-	$(SPHINXBUILD) -b xml $(ALLSPHINXOPTS) $(BUILDDIR)/xml
-	@echo
-	@echo "Build finished. The XML files are in $(BUILDDIR)/xml."
-
-pseudoxml:
-	$(SPHINXBUILD) -b pseudoxml $(ALLSPHINXOPTS) $(BUILDDIR)/pseudoxml
-	@echo
-	@echo "Build finished. The pseudo-XML files are in $(BUILDDIR)/pseudoxml."

docs/build.gradle

+
+plugins {
+  id "kr.motd.sphinx" version "2.6.1"
+  id "nebula.ospackage"
+}
+
+// Apply the 'base' plugin, which adds the 'site' task.
+// Note: You do not need to apply the 'base' plugin if you applied
+//       other plugin that extends 'base', such as 'java'.
+apply plugin: 'base'
+
+ext {
+    // Filled dynamically by packaging tasks
+    debFile = ""
+    rpmFile = ""
+}
+
+sphinx {
+  sourceDirectory = "${projectDir}"
+  outputDirectory = "${project.buildDir}/html"
+}
+
+build.dependsOn site
+
+tasks.withType(Deb) {
+    dependsOn(site)
+    doLast {
+        project.debFile = archiveName;
+    }
+}
+
+tasks.withType(Rpm) {
+    dependsOn(site)
+    doLast {
+        project.rpmFile = archiveName;
+    }
+}
+
+ospackage {
+    os = LINUX
+    arch = 'noarch'
+    packageName "dariah-$project.name"
+    replaces "$project.name"
+    maintainer 'info@de.dariah.eu'
+    signingKeyId('CB012F105B632B46C2A7B4918FC46DAC1BC3E238')
+
+    from("$buildDir/html") {
+        into "var/www/doc/dariah-$project.name/"
+    }
+}
+
+task publishDebPackage {
+    dependsOn buildDeb
+    def distroPath = "$buildDir/distributions/"
+    doLast {
+        if (version.endsWith('SNAPSHOT') || version.endsWith('RELEASE')) {
+            println "Publishing Debian package $debFile as user $repoUser";
+            exec {
+                executable "curl"
+                args "-f", "-u", "$repoUser:$repoPass", "-H", "Content-Type: multipart/form-data", "--data-binary", "@$distroPath$debFile", "$aptRepo";
+            }
+        }
+    }
+}
+
+task publishRpmPackage {
+    dependsOn buildRpm
+    def distroPath = "$buildDir/distributions/"
+    doLast {
+        if (version.endsWith('SNAPSHOT') || version.endsWith('RELEASE')) {
+            println "Publishing Rpm package $rpmFile as user $repoUser";
+            exec {
+                executable "curl"
+                args "-f", "-u", "$repoUser:$repoPass", "--upload-file", "$distroPath$rpmFile", "$yumRepo/dariah/${project.name}/${project.version}/$rpmFile";
+            }
+        }
+    }
+}
+
+task publish {
+  dependsOn publishDebPackage
+  dependsOn publishRpmPackage
+}
\ No newline at end of file

docs/gradle/wrapper/gradle-wrapper.properties

+distributionBase=GRADLE_USER_HOME
+distributionPath=wrapper/dists
+distributionUrl=https\://services.gradle.org/distributions/gradle-5.6.4-bin.zip
+zipStoreBase=GRADLE_USER_HOME
+zipStorePath=wrapper/dists

docs/gradlew

+#!/usr/bin/env sh
+
+#
+# Copyright 2015 the original author or authors.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      https://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+
+##############################################################################
+##
+##  Gradle start up script for UN*X
+##
+##############################################################################
+
+# Attempt to set APP_HOME
+# Resolve links: $0 may be a link
+PRG="$0"
+# Need this for relative symlinks.
+while [ -h "$PRG" ] ; do
+    ls=`ls -ld "$PRG"`
+    link=`expr "$ls" : '.*-> \(.*\)$'`
+    if expr "$link" : '/.*' > /dev/null; then
+        PRG="$link"
+    else
+        PRG=`dirname "$PRG"`"/$link"
+    fi
+done
+SAVED="`pwd`"
+cd "`dirname \"$PRG\"`/" >/dev/null
+APP_HOME="`pwd -P`"
+cd "$SAVED" >/dev/null
+
+APP_NAME="Gradle"
+APP_BASE_NAME=`basename "$0"`
+
+# Add default JVM options here. You can also use JAVA_OPTS and GRADLE_OPTS to pass JVM options to this script.
+DEFAULT_JVM_OPTS='"-Xmx64m" "-Xms64m"'
+
+# Use the maximum available, or set MAX_FD != -1 to use that value.
+MAX_FD="maximum"
+
+warn () {
+    echo "$*"
+}
+
+die () {
+    echo
+    echo "$*"
+    echo
+    exit 1
+}
+
+# OS specific support (must be 'true' or 'false').
+cygwin=false
+msys=false
+darwin=false
+nonstop=false
+case "`uname`" in
+  CYGWIN* )
+    cygwin=true
+    ;;
+  Darwin* )
+    darwin=true
+    ;;
+  MINGW* )
+    msys=true
+    ;;
+  NONSTOP* )
+    nonstop=true
+    ;;
+esac
+
+CLASSPATH=$APP_HOME/gradle/wrapper/gradle-wrapper.jar
+
+# Determine the Java command to use to start the JVM.
+if [ -n "$JAVA_HOME" ] ; then
+    if [ -x "$JAVA_HOME/jre/sh/java" ] ; then
+        # IBM's JDK on AIX uses strange locations for the executables
+        JAVACMD="$JAVA_HOME/jre/sh/java"
+    else
+        JAVACMD="$JAVA_HOME/bin/java"
+    fi
+    if [ ! -x "$JAVACMD" ] ; then
+        die "ERROR: JAVA_HOME is set to an invalid directory: $JAVA_HOME
+
+Please set the JAVA_HOME variable in your environment to match the
+location of your Java installation."
+    fi
+else
+    JAVACMD="java"
+    which java >/dev/null 2>&1 || die "ERROR: JAVA_HOME is not set and no 'java' command could be found in your PATH.
+
+Please set the JAVA_HOME variable in your environment to match the
+location of your Java installation."
+fi
+
+# Increase the maximum file descriptors if we can.
+if [ "$cygwin" = "false" -a "$darwin" = "false" -a "$nonstop" = "false" ] ; then
+    MAX_FD_LIMIT=`ulimit -H -n`
+    if [ $? -eq 0 ] ; then
+        if [ "$MAX_FD" = "maximum" -o "$MAX_FD" = "max" ] ; then
+            MAX_FD="$MAX_FD_LIMIT"
+        fi
+        ulimit -n $MAX_FD
+        if [ $? -ne 0 ] ; then
+            warn "Could not set maximum file descriptor limit: $MAX_FD"
+        fi
+    else
+        warn "Could not query maximum file descriptor limit: $MAX_FD_LIMIT"
+    fi
+fi
+
+# For Darwin, add options to specify how the application appears in the dock
+if $darwin; then
+    GRADLE_OPTS="$GRADLE_OPTS \"-Xdock:name=$APP_NAME\" \"-Xdock:icon=$APP_HOME/media/gradle.icns\""
+fi
+
+# For Cygwin or MSYS, switch paths to Windows format before running java
+if [ "$cygwin" = "true" -o "$msys" = "true" ] ; then
+    APP_HOME=`cygpath --path --mixed "$APP_HOME"`
+    CLASSPATH=`cygpath --path --mixed "$CLASSPATH"`
+    JAVACMD=`cygpath --unix "$JAVACMD"`
+
+    # We build the pattern for arguments to be converted via cygpath
+    ROOTDIRSRAW=`find -L / -maxdepth 1 -mindepth 1 -type d 2>/dev/null`
+    SEP=""
+    for dir in $ROOTDIRSRAW ; do
+        ROOTDIRS="$ROOTDIRS$SEP$dir"
+        SEP="|"
+    done
+    OURCYGPATTERN="(^($ROOTDIRS))"
+    # Add a user-defined pattern to the cygpath arguments
+    if [ "$GRADLE_CYGPATTERN" != "" ] ; then
+        OURCYGPATTERN="$OURCYGPATTERN|($GRADLE_CYGPATTERN)"
+    fi
+    # Now convert the arguments - kludge to limit ourselves to /bin/sh
+    i=0
+    for arg in "$@" ; do
+        CHECK=`echo "$arg"|egrep -c "$OURCYGPATTERN" -`
+        CHECK2=`echo "$arg"|egrep -c "^-"`                                 ### Determine if an option
+
+        if [ $CHECK -ne 0 ] && [ $CHECK2 -eq 0 ] ; then                    ### Added a condition
+            eval `echo args$i`=`cygpath --path --ignore --mixed "$arg"`
+        else
+            eval `echo args$i`="\"$arg\""
+        fi
+        i=$((i+1))
+    done
+    case $i in
+        (0) set -- ;;
+        (1) set -- "$args0" ;;
+        (2) set -- "$args0" "$args1" ;;
+        (3) set -- "$args0" "$args1" "$args2" ;;
+        (4) set -- "$args0" "$args1" "$args2" "$args3" ;;
+        (5) set -- "$args0" "$args1" "$args2" "$args3" "$args4" ;;
+        (6) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" ;;
+        (7) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" ;;
+        (8) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" "$args7" ;;
+        (9) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" "$args7" "$args8" ;;
+    esac
+fi
+
+# Escape application args
+save () {
+    for i do printf %s\\n "$i" | sed "s/'/'\\\\''/g;1s/^/'/;\$s/\$/' \\\\/" ; done
+    echo " "
+}
+APP_ARGS=$(save "$@")
+
+# Collect all arguments for the java command, following the shell quoting and substitution rules
+eval set -- $DEFAULT_JVM_OPTS $JAVA_OPTS $GRADLE_OPTS "\"-Dorg.gradle.appname=$APP_BASE_NAME\"" -classpath "\"$CLASSPATH\"" org.gradle.wrapper.GradleWrapperMain "$APP_ARGS"
+
+# by default we should be in the correct project dir, but when run from Finder on Mac, the cwd is wrong
+if [ "$(uname)" = "Darwin" ] && [ "$HOME" = "$PWD" ]; then
+  cd "$(dirname "$0")"
+fi
+
+exec "$JAVACMD" "$@"

docs/gradlew.bat

+@rem
+@rem Copyright 2015 the original author or authors.
+@rem
+@rem Licensed under the Apache License, Version 2.0 (the "License");
+@rem you may not use this file except in compliance with the License.
+@rem You may obtain a copy of the License at
+@rem
+@rem      https://www.apache.org/licenses/LICENSE-2.0
+@rem
+@rem Unless required by applicable law or agreed to in writing, software
+@rem distributed under the License is distributed on an "AS IS" BASIS,
+@rem WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+@rem See the License for the specific language governing permissions and
+@rem limitations under the License.
+@rem
+
+@if "%DEBUG%" == "" @echo off
+@rem ##########################################################################
+@rem
+@rem  Gradle startup script for Windows
+@rem
+@rem ##########################################################################
+
+@rem Set local scope for the variables with windows NT shell
+if "%OS%"=="Windows_NT" setlocal
+
+set DIRNAME=%~dp0
+if "%DIRNAME%" == "" set DIRNAME=.
+set APP_BASE_NAME=%~n0
+set APP_HOME=%DIRNAME%
+
+@rem Add default JVM options here. You can also use JAVA_OPTS and GRADLE_OPTS to pass JVM options to this script.
+set DEFAULT_JVM_OPTS="-Xmx64m" "-Xms64m"
+
+@rem Find java.exe
+if defined JAVA_HOME goto findJavaFromJavaHome
+
+set JAVA_EXE=java.exe
+%JAVA_EXE% -version >NUL 2>&1
+if "%ERRORLEVEL%" == "0" goto init
+
+echo.
+echo ERROR: JAVA_HOME is not set and no 'java' command could be found in your PATH.
+echo.
+echo Please set the JAVA_HOME variable in your environment to match the
+echo location of your Java installation.
+
+goto fail
+
+:findJavaFromJavaHome
+set JAVA_HOME=%JAVA_HOME:"=%
+set JAVA_EXE=%JAVA_HOME%/bin/java.exe
+
+if exist "%JAVA_EXE%" goto init
+
+echo.
+echo ERROR: JAVA_HOME is set to an invalid directory: %JAVA_HOME%
+echo.
+echo Please set the JAVA_HOME variable in your environment to match the
+echo location of your Java installation.
+
+goto fail
+
+:init
+@rem Get command-line arguments, handling Windows variants
+
+if not "%OS%" == "Windows_NT" goto win9xME_args
+
+:win9xME_args
+@rem Slurp the command line arguments.
+set CMD_LINE_ARGS=
+set _SKIP=2
+
+:win9xME_args_slurp
+if "x%~1" == "x" goto execute
+
+set CMD_LINE_ARGS=%*
+
+:execute
+@rem Setup the command line
+
+set CLASSPATH=%APP_HOME%\gradle\wrapper\gradle-wrapper.jar
+
+@rem Execute Gradle
+"%JAVA_EXE%" %DEFAULT_JVM_OPTS% %JAVA_OPTS% %GRADLE_OPTS% "-Dorg.gradle.appname=%APP_BASE_NAME%" -classpath "%CLASSPATH%" org.gradle.wrapper.GradleWrapperMain %CMD_LINE_ARGS%
+
+:end
+@rem End local scope for the variables with windows NT shell
+if "%ERRORLEVEL%"=="0" goto mainEnd
+
+:fail
+rem Set variable GRADLE_EXIT_CONSOLE if you need the _script_ return code instead of
+rem the _cmd.exe /c_ return code!
+if  not "" == "%GRADLE_EXIT_CONSOLE%" exit 1
+exit /b 1
+
+:mainEnd
+if "%OS%"=="Windows_NT" endlocal
+
+:omega

docs/make.bat

-@ECHO OFF
-
-REM Command file for Sphinx documentation
-
-if "%SPHINXBUILD%" == "" (
-	set SPHINXBUILD=sphinx-build
-)
-set BUILDDIR=_build
-set ALLSPHINXOPTS=-d %BUILDDIR%/doctrees %SPHINXOPTS% .
-set I18NSPHINXOPTS=%SPHINXOPTS% .
-if NOT "%PAPER%" == "" (
-	set ALLSPHINXOPTS=-D latex_paper_size=%PAPER% %ALLSPHINXOPTS%
-	set I18NSPHINXOPTS=-D latex_paper_size=%PAPER% %I18NSPHINXOPTS%
-)
-
-if "%1" == "" goto help
-
-if "%1" == "help" (
-	:help
-	echo.Please use `make ^<target^>` where ^<target^> is one of
-	echo.  html       to make standalone HTML files
-	echo.  dirhtml    to make HTML files named index.html in directories
-	echo.  singlehtml to make a single large HTML file
-	echo.  pickle     to make pickle files
-	echo.  json       to make JSON files
-	echo.  htmlhelp   to make HTML files and a HTML help project
-	echo.  qthelp     to make HTML files and a qthelp project
-	echo.  devhelp    to make HTML files and a Devhelp project
-	echo.  epub       to make an epub
-	echo.  latex      to make LaTeX files, you can set PAPER=a4 or PAPER=letter
-	echo.  text       to make text files
-	echo.  man        to make manual pages
-	echo.  texinfo    to make Texinfo files
-	echo.  gettext    to make PO message catalogs
-	echo.  changes    to make an overview over all changed/added/deprecated items
-	echo.  xml        to make Docutils-native XML files
-	echo.  pseudoxml  to make pseudoxml-XML files for display purposes
-	echo.  linkcheck  to check all external links for integrity
-	echo.  doctest    to run all doctests embedded in the documentation if enabled
-	echo.  coverage   to run coverage check of the documentation if enabled
-	goto end
-)
-
-if "%1" == "clean" (
-	for /d %%i in (%BUILDDIR%\*) do rmdir /q /s %%i
-	del /q /s %BUILDDIR%\*
-	goto end
-)
-
-
-REM Check if sphinx-build is available and fallback to Python version if any
-%SPHINXBUILD% 2> nul
-if errorlevel 9009 goto sphinx_python
-goto sphinx_ok
-
-:sphinx_python
-
-set SPHINXBUILD=python -m sphinx.__init__
-%SPHINXBUILD% 2> nul
-if errorlevel 9009 (
-	echo.
-	echo.The 'sphinx-build' command was not found. Make sure you have Sphinx
-	echo.installed, then set the SPHINXBUILD environment variable to point
-	echo.to the full path of the 'sphinx-build' executable. Alternatively you
-	echo.may add the Sphinx directory to PATH.
-	echo.
-	echo.If you don't have Sphinx installed, grab it from
-	echo.http://sphinx-doc.org/
-	exit /b 1
-)
-
-:sphinx_ok
-
-
-if "%1" == "html" (
-	%SPHINXBUILD% -b html %ALLSPHINXOPTS% %BUILDDIR%/html
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.Build finished. The HTML pages are in %BUILDDIR%/html.
-	goto end
-)
-
-if "%1" == "dirhtml" (
-	%SPHINXBUILD% -b dirhtml %ALLSPHINXOPTS% %BUILDDIR%/dirhtml
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.Build finished. The HTML pages are in %BUILDDIR%/dirhtml.
-	goto end
-)
-
-if "%1" == "singlehtml" (
-	%SPHINXBUILD% -b singlehtml %ALLSPHINXOPTS% %BUILDDIR%/singlehtml
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.Build finished. The HTML pages are in %BUILDDIR%/singlehtml.
-	goto end
-)
-
-if "%1" == "pickle" (
-	%SPHINXBUILD% -b pickle %ALLSPHINXOPTS% %BUILDDIR%/pickle
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.Build finished; now you can process the pickle files.
-	goto end
-)
-
-if "%1" == "json" (
-	%SPHINXBUILD% -b json %ALLSPHINXOPTS% %BUILDDIR%/json
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.Build finished; now you can process the JSON files.
-	goto end
-)
-
-if "%1" == "htmlhelp" (
-	%SPHINXBUILD% -b htmlhelp %ALLSPHINXOPTS% %BUILDDIR%/htmlhelp
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.Build finished; now you can run HTML Help Workshop with the ^
-.hhp project file in %BUILDDIR%/htmlhelp.
-	goto end
-)
-
-if "%1" == "qthelp" (
-	%SPHINXBUILD% -b qthelp %ALLSPHINXOPTS% %BUILDDIR%/qthelp
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.Build finished; now you can run "qcollectiongenerator" with the ^
-.qhcp project file in %BUILDDIR%/qthelp, like this:
-	echo.^> qcollectiongenerator %BUILDDIR%\qthelp\tgimport.qhcp
-	echo.To view the help file:
-	echo.^> assistant -collectionFile %BUILDDIR%\qthelp\tgimport.ghc
-	goto end
-)
-
-if "%1" == "devhelp" (
-	%SPHINXBUILD% -b devhelp %ALLSPHINXOPTS% %BUILDDIR%/devhelp
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.Build finished.
-	goto end
-)
-
-if "%1" == "epub" (
-	%SPHINXBUILD% -b epub %ALLSPHINXOPTS% %BUILDDIR%/epub
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.Build finished. The epub file is in %BUILDDIR%/epub.
-	goto end
-)
-
-if "%1" == "latex" (
-	%SPHINXBUILD% -b latex %ALLSPHINXOPTS% %BUILDDIR%/latex
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.Build finished; the LaTeX files are in %BUILDDIR%/latex.
-	goto end
-)
-
-if "%1" == "latexpdf" (
-	%SPHINXBUILD% -b latex %ALLSPHINXOPTS% %BUILDDIR%/latex
-	cd %BUILDDIR%/latex
-	make all-pdf
-	cd %~dp0
-	echo.
-	echo.Build finished; the PDF files are in %BUILDDIR%/latex.
-	goto end
-)
-
-if "%1" == "latexpdfja" (
-	%SPHINXBUILD% -b latex %ALLSPHINXOPTS% %BUILDDIR%/latex
-	cd %BUILDDIR%/latex
-	make all-pdf-ja
-	cd %~dp0
-	echo.
-	echo.Build finished; the PDF files are in %BUILDDIR%/latex.
-	goto end
-)
-
-if "%1" == "text" (
-	%SPHINXBUILD% -b text %ALLSPHINXOPTS% %BUILDDIR%/text
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.Build finished. The text files are in %BUILDDIR%/text.
-	goto end
-)
-
-if "%1" == "man" (
-	%SPHINXBUILD% -b man %ALLSPHINXOPTS% %BUILDDIR%/man
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.Build finished. The manual pages are in %BUILDDIR%/man.
-	goto end
-)
-
-if "%1" == "texinfo" (
-	%SPHINXBUILD% -b texinfo %ALLSPHINXOPTS% %BUILDDIR%/texinfo
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.Build finished. The Texinfo files are in %BUILDDIR%/texinfo.
-	goto end
-)
-
-if "%1" == "gettext" (
-	%SPHINXBUILD% -b gettext %I18NSPHINXOPTS% %BUILDDIR%/locale
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.Build finished. The message catalogs are in %BUILDDIR%/locale.
-	goto end
-)
-
-if "%1" == "changes" (
-	%SPHINXBUILD% -b changes %ALLSPHINXOPTS% %BUILDDIR%/changes
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.The overview file is in %BUILDDIR%/changes.
-	goto end
-)
-
-if "%1" == "linkcheck" (
-	%SPHINXBUILD% -b linkcheck %ALLSPHINXOPTS% %BUILDDIR%/linkcheck
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.Link check complete; look for any errors in the above output ^
-or in %BUILDDIR%/linkcheck/output.txt.
-	goto end
-)
-
-if "%1" == "doctest" (
-	%SPHINXBUILD% -b doctest %ALLSPHINXOPTS% %BUILDDIR%/doctest
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.Testing of doctests in the sources finished, look at the ^
-results in %BUILDDIR%/doctest/output.txt.
-	goto end
-)
-
-if "%1" == "coverage" (
-	%SPHINXBUILD% -b coverage %ALLSPHINXOPTS% %BUILDDIR%/coverage
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.Testing of coverage in the sources finished, look at the ^
-results in %BUILDDIR%/coverage/python.txt.
-	goto end
-)
-
-if "%1" == "xml" (
-	%SPHINXBUILD% -b xml %ALLSPHINXOPTS% %BUILDDIR%/xml
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.Build finished. The XML files are in %BUILDDIR%/xml.
-	goto end
-)
-
-if "%1" == "pseudoxml" (
-	%SPHINXBUILD% -b pseudoxml %ALLSPHINXOPTS% %BUILDDIR%/pseudoxml
-	if errorlevel 1 exit /b 1
-	echo.
-	echo.Build finished. The pseudo-XML files are in %BUILDDIR%/pseudoxml.
-	goto end
-)
-
-:end

docs/settings.gradle

+rootProject.name = 'dme-docs'

gradle/wrapper/gradle-wrapper.properties

+distributionBase=GRADLE_USER_HOME
+distributionPath=wrapper/dists
+distributionUrl=https\://services.gradle.org/distributions/gradle-5.6.4-bin.zip
+zipStoreBase=GRADLE_USER_HOME
+zipStorePath=wrapper/dists

gradlew

+#!/usr/bin/env sh
+
+#
+# Copyright 2015 the original author or authors.
+#
+# Licensed under the Apache License, Version 2.0 (the "License");
+# you may not use this file except in compliance with the License.
+# You may obtain a copy of the License at
+#
+#      https://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+
+##############################################################################
+##
+##  Gradle start up script for UN*X
+##
+##############################################################################
+
+# Attempt to set APP_HOME
+# Resolve links: $0 may be a link
+PRG="$0"
+# Need this for relative symlinks.
+while [ -h "$PRG" ] ; do
+    ls=`ls -ld "$PRG"`
+    link=`expr "$ls" : '.*-> \(.*\)$'`
+    if expr "$link" : '/.*' > /dev/null; then
+        PRG="$link"
+    else
+        PRG=`dirname "$PRG"`"/$link"
+    fi
+done
+SAVED="`pwd`"
+cd "`dirname \"$PRG\"`/" >/dev/null
+APP_HOME="`pwd -P`"
+cd "$SAVED" >/dev/null
+
+APP_NAME="Gradle"
+APP_BASE_NAME=`basename "$0"`
+
+# Add default JVM options here. You can also use JAVA_OPTS and GRADLE_OPTS to pass JVM options to this script.
+DEFAULT_JVM_OPTS='"-Xmx64m" "-Xms64m"'
+
+# Use the maximum available, or set MAX_FD != -1 to use that value.
+MAX_FD="maximum"
+
+warn () {
+    echo "$*"
+}
+
+die () {
+    echo
+    echo "$*"
+    echo
+    exit 1
+}
+
+# OS specific support (must be 'true' or 'false').
+cygwin=false
+msys=false
+darwin=false
+nonstop=false
+case "`uname`" in
+  CYGWIN* )
+    cygwin=true
+    ;;
+  Darwin* )
+    darwin=true
+    ;;
+  MINGW* )
+    msys=true
+    ;;
+  NONSTOP* )
+    nonstop=true
+    ;;
+esac
+
+CLASSPATH=$APP_HOME/gradle/wrapper/gradle-wrapper.jar
+
+# Determine the Java command to use to start the JVM.
+if [ -n "$JAVA_HOME" ] ; then
+    if [ -x "$JAVA_HOME/jre/sh/java" ] ; then
+        # IBM's JDK on AIX uses strange locations for the executables
+        JAVACMD="$JAVA_HOME/jre/sh/java"
+    else
+        JAVACMD="$JAVA_HOME/bin/java"
+    fi
+    if [ ! -x "$JAVACMD" ] ; then
+        die "ERROR: JAVA_HOME is set to an invalid directory: $JAVA_HOME
+
+Please set the JAVA_HOME variable in your environment to match the
+location of your Java installation."
+    fi
+else
+    JAVACMD="java"
+    which java >/dev/null 2>&1 || die "ERROR: JAVA_HOME is not set and no 'java' command could be found in your PATH.
+
+Please set the JAVA_HOME variable in your environment to match the
+location of your Java installation."
+fi
+
+# Increase the maximum file descriptors if we can.
+if [ "$cygwin" = "false" -a "$darwin" = "false" -a "$nonstop" = "false" ] ; then
+    MAX_FD_LIMIT=`ulimit -H -n`
+    if [ $? -eq 0 ] ; then
+        if [ "$MAX_FD" = "maximum" -o "$MAX_FD" = "max" ] ; then
+            MAX_FD="$MAX_FD_LIMIT"
+        fi
+        ulimit -n $MAX_FD
+        if [ $? -ne 0 ] ; then
+            warn "Could not set maximum file descriptor limit: $MAX_FD"
+        fi
+    else
+        warn "Could not query maximum file descriptor limit: $MAX_FD_LIMIT"
+    fi
+fi
+
+# For Darwin, add options to specify how the application appears in the dock
+if $darwin; then
+    GRADLE_OPTS="$GRADLE_OPTS \"-Xdock:name=$APP_NAME\" \"-Xdock:icon=$APP_HOME/media/gradle.icns\""
+fi
+
+# For Cygwin or MSYS, switch paths to Windows format before running java
+if [ "$cygwin" = "true" -o "$msys" = "true" ] ; then
+    APP_HOME=`cygpath --path --mixed "$APP_HOME"`
+    CLASSPATH=`cygpath --path --mixed "$CLASSPATH"`
+    JAVACMD=`cygpath --unix "$JAVACMD"`
+
+    # We build the pattern for arguments to be converted via cygpath
+    ROOTDIRSRAW=`find -L / -maxdepth 1 -mindepth 1 -type d 2>/dev/null`
+    SEP=""
+    for dir in $ROOTDIRSRAW ; do
+        ROOTDIRS="$ROOTDIRS$SEP$dir"
+        SEP="|"
+    done
+    OURCYGPATTERN="(^($ROOTDIRS))"
+    # Add a user-defined pattern to the cygpath arguments
+    if [ "$GRADLE_CYGPATTERN" != "" ] ; then
+        OURCYGPATTERN="$OURCYGPATTERN|($GRADLE_CYGPATTERN)"
+    fi
+    # Now convert the arguments - kludge to limit ourselves to /bin/sh
+    i=0
+    for arg in "$@" ; do
+        CHECK=`echo "$arg"|egrep -c "$OURCYGPATTERN" -`
+        CHECK2=`echo "$arg"|egrep -c "^-"`                                 ### Determine if an option
+
+        if [ $CHECK -ne 0 ] && [ $CHECK2 -eq 0 ] ; then                    ### Added a condition
+            eval `echo args$i`=`cygpath --path --ignore --mixed "$arg"`
+        else
+            eval `echo args$i`="\"$arg\""
+        fi
+        i=$((i+1))
+    done
+    case $i in
+        (0) set -- ;;
+        (1) set -- "$args0" ;;
+        (2) set -- "$args0" "$args1" ;;
+        (3) set -- "$args0" "$args1" "$args2" ;;
+        (4) set -- "$args0" "$args1" "$args2" "$args3" ;;
+        (5) set -- "$args0" "$args1" "$args2" "$args3" "$args4" ;;
+        (6) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" ;;
+        (7) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" ;;
+        (8) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" "$args7" ;;
+        (9) set -- "$args0" "$args1" "$args2" "$args3" "$args4" "$args5" "$args6" "$args7" "$args8" ;;
+    esac
+fi
+
+# Escape application args
+save () {
+    for i do printf %s\\n "$i" | sed "s/'/'\\\\''/g;1s/^/'/;\$s/\$/' \\\\/" ; done
+    echo " "
+}
+APP_ARGS=$(save "$@")
+
+# Collect all arguments for the java command, following the shell quoting and substitution rules
+eval set -- $DEFAULT_JVM_OPTS $JAVA_OPTS $GRADLE_OPTS "\"-Dorg.gradle.appname=$APP_BASE_NAME\"" -classpath "\"$CLASSPATH\"" org.gradle.wrapper.GradleWrapperMain "$APP_ARGS"
+
+# by default we should be in the correct project dir, but when run from Finder on Mac, the cwd is wrong
+if [ "$(uname)" = "Darwin" ] && [ "$HOME" = "$PWD" ]; then
+  cd "$(dirname "$0")"
+fi
+
+exec "$JAVACMD" "$@"

gradlew.bat

+@rem
+@rem Copyright 2015 the original author or authors.
+@rem
+@rem Licensed under the Apache License, Version 2.0 (the "License");
+@rem you may not use this file except in compliance with the License.
+@rem You may obtain a copy of the License at
+@rem
+@rem      https://www.apache.org/licenses/LICENSE-2.0
+@rem
+@rem Unless required by applicable law or agreed to in writing, software
+@rem distributed under the License is distributed on an "AS IS" BASIS,
+@rem WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+@rem See the License for the specific language governing permissions and
+@rem limitations under the License.
+@rem
+
+@if "%DEBUG%" == "" @echo off
+@rem ##########################################################################
+@rem
+@rem  Gradle startup script for Windows
+@rem
+@rem ##########################################################################
+
+@rem Set local scope for the variables with windows NT shell
+if "%OS%"=="Windows_NT" setlocal
+
+set DIRNAME=%~dp0
+if "%DIRNAME%" == "" set DIRNAME=.
+set APP_BASE_NAME=%~n0
+set APP_HOME=%DIRNAME%
+
+@rem Add default JVM options here. You can also use JAVA_OPTS and GRADLE_OPTS to pass JVM options to this script.
+set DEFAULT_JVM_OPTS="-Xmx64m" "-Xms64m"
+
+@rem Find java.exe
+if defined JAVA_HOME goto findJavaFromJavaHome
+
+set JAVA_EXE=java.exe
+%JAVA_EXE% -version >NUL 2>&1
+if "%ERRORLEVEL%" == "0" goto init
+
+echo.
+echo ERROR: JAVA_HOME is not set and no 'java' command could be found in your PATH.
+echo.
+echo Please set the JAVA_HOME variable in your environment to match the
+echo location of your Java installation.
+
+goto fail
+
+:findJavaFromJavaHome
+set JAVA_HOME=%JAVA_HOME:"=%
+set JAVA_EXE=%JAVA_HOME%/bin/java.exe
+
+if exist "%JAVA_EXE%" goto init
+
+echo.
+echo ERROR: JAVA_HOME is set to an invalid directory: %JAVA_HOME%
+echo.
+echo Please set the JAVA_HOME variable in your environment to match the
+echo location of your Java installation.
+
+goto fail
+
+:init
+@rem Get command-line arguments, handling Windows variants
+
+if not "%OS%" == "Windows_NT" goto win9xME_args
+
+:win9xME_args
+@rem Slurp the command line arguments.
+set CMD_LINE_ARGS=
+set _SKIP=2
+
+:win9xME_args_slurp
+if "x%~1" == "x" goto execute
+
+set CMD_LINE_ARGS=%*
+
+:execute
+@rem Setup the command line
+
+set CLASSPATH=%APP_HOME%\gradle\wrapper\gradle-wrapper.jar
+
+@rem Execute Gradle
+"%JAVA_EXE%" %DEFAULT_JVM_OPTS% %JAVA_OPTS% %GRADLE_OPTS% "-Dorg.gradle.appname=%APP_BASE_NAME%" -classpath "%CLASSPATH%" org.gradle.wrapper.GradleWrapperMain %CMD_LINE_ARGS%
+
+:end
+@rem End local scope for the variables with windows NT shell
+if "%ERRORLEVEL%"=="0" goto mainEnd
+
+:fail
+rem Set variable GRADLE_EXIT_CONSOLE if you need the _script_ return code instead of
+rem the _cmd.exe /c_ return code!
+if  not "" == "%GRADLE_EXIT_CONSOLE%" exit 1
+exit /b 1
+
+:mainEnd
+if "%OS%"=="Windows_NT" endlocal
+
+:omega

pom.xml

-<project xmlns="http://maven.apache.org/POM/4.0.0" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
-	xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
-	<modelVersion>4.0.0</modelVersion>
-	<groupId>de.unibamberg.minf</groupId>
-	<artifactId>dme</artifactId>
-	<version>3.5.11-RELEASE</version>
-	<packaging>war</packaging>
-	<name>DARIAH-DE Data Modeling Environment</name>
-	<description>DARIAH-DE Data Modeling Environment</description>
-	<properties>
-		<java-version>1.8</java-version>
-		<maven.compiler.source>1.8</maven.compiler.source>
-		<maven.compiler.target>1.8</maven.compiler.target>
-		<project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
-		<project.reporting.outputEncoding>UTF-8</project.reporting.outputEncoding>
-	
-   		<de.unibamberg.minf.core-version>5.1.2-RELEASE</de.unibamberg.minf.core-version>
-		<de.unibamberg.minf.gtf-version>1.5.6-RELEASE</de.unibamberg.minf.gtf-version>
-		<eu.dariah.de.minfba.processing.version>3.7.5-RELEASE</eu.dariah.de.minfba.processing.version>
-
-		<eu.dariah.de.dariahsp-version>1.2.4-SNAPSHOT</eu.dariah.de.dariahsp-version>
-
-		<com.fasterxml.jackson-version>2.9.6</com.fasterxml.jackson-version>
-
-		<org.springframework-version>4.3.6.RELEASE</org.springframework-version>
-		<org.springsecurity-version>4.2.1.RELEASE</org.springsecurity-version>
-		<org.apache.tiles-version>3.0.7</org.apache.tiles-version>
-		<org.slf4j-version>1.7.22</org.slf4j-version>
-		<ch.qos.logback.version>1.1.3</ch.qos.logback.version>
-		<org.antlr4-version>4.7.2</org.antlr4-version>
-	</properties>
-
-	<dependencies>
-	
-		<!-- DARIAH -->
-		<dependency>
-			<groupId>de.unibamberg.minf.core</groupId>
-			<artifactId>core-metamodel</artifactId>
-			<version>${de.unibamberg.minf.core-version}</version>
-		</dependency>
-		
-		<!-- To import old schemas for migration -->
-		<dependency>
-			<groupId>eu.dariah.de.minfba.core-legacy</groupId>
-			<artifactId>core-metamodel</artifactId>
-			<version>3.3.1</version>
-		</dependency>
-		
-		<dependency>
-			<groupId>de.unibamberg.minf.core</groupId>
-			<artifactId>core-web</artifactId>
-			<version>${de.unibamberg.minf.core-version}</version>
-		</dependency>
-		<dependency>
-			<groupId>de.unibamberg.minf.core</groupId>
-			<artifactId>core-util</artifactId>
-			<version>${de.unibamberg.minf.core-version}</version>
-		</dependency>
-				
-		<dependency>
-			<groupId>de.unibamberg.minf.gtf</groupId>
-			<artifactId>gtf-base</artifactId>
-			<version>${de.unibamberg.minf.gtf-version}</version>
-		</dependency>
-		<dependency>
-			<groupId>de.unibamberg.minf.gtf</groupId>
-			<artifactId>gtf-core</artifactId>
-			<version>${de.unibamberg.minf.gtf-version}</version>
-		</dependency>
-		<dependency>
-			<groupId>de.unibamberg.minf.gtf</groupId>
-			<artifactId>gtf-extension-file</artifactId>
-			<version>${de.unibamberg.minf.gtf-version}</version>
-		</dependency>
-		<dependency>
-			<groupId>de.unibamberg.minf.gtf</groupId>
-			<artifactId>gtf-extension-wiki</artifactId>
-			<version>${de.unibamberg.minf.gtf-version}</version>
-		</dependency>
-		<dependency>
-			<groupId>de.unibamberg.minf.gtf</groupId>
-			<artifactId>gtf-extension-geo</artifactId>
-			<version>${de.unibamberg.minf.gtf-version}</version>
-		</dependency>
-		<dependency>
-			<groupId>de.unibamberg.minf.gtf</groupId>
-			<artifactId>gtf-extension-nlp</artifactId>
-			<version>${de.unibamberg.minf.gtf-version}</version>
-		</dependency>
-		<dependency>
-			<groupId>de.unibamberg.minf.gtf</groupId>
-			<artifactId>gtf-extension-vocabulary</artifactId>
-			<version>${de.unibamberg.minf.gtf-version}</version>
-		</dependency>
-		<dependency>
-			<groupId>de.unibamberg.minf.gtf</groupId>
-			<artifactId>gtf-extension-dai</artifactId>
-			<version>${de.unibamberg.minf.gtf-version}</version>
-		</dependency>
-		
-		<dependency>
-			<groupId>de.unibamberg.minf.processing</groupId>
-			<artifactId>processing</artifactId>
-			<version>${eu.dariah.de.minfba.processing.version}</version>
-		</dependency>
-
-		<!-- Spring -->
-		<dependency>
-			<groupId>org.springframework</groupId>
-			<artifactId>spring-context</artifactId>
-			<version>${org.springframework-version}</version>
-			<exclusions>
-				<!-- Exclude Commons Logging in favor of SLF4j -->
-				<exclusion>
-					<groupId>commons-logging</groupId>
-					<artifactId>commons-logging</artifactId>
-				</exclusion>
-			</exclusions>
-		</dependency>
-		<dependency>
-			<groupId>org.springframework</groupId>
-			<artifactId>spring-core</artifactId>
-			<version>${org.springframework-version}</version>
-		</dependency>
-		<dependency>
-			<groupId>org.springframework</groupId>
-			<artifactId>spring-beans</artifactId>
-			<version>${org.springframework-version}</version>
-		</dependency>
-		<dependency>
-			<groupId>org.springframework</groupId>
-			<artifactId>spring-webmvc</artifactId>
-			<version>${org.springframework-version}</version>
-		</dependency>
-		<dependency>
-			<groupId>org.springframework</groupId>
-			<artifactId>spring-web</artifactId>
-			<version>${org.springframework-version}</version>
-		</dependency>
-		<dependency>
-			<groupId>org.apache.httpcomponents</groupId>
-			<artifactId>httpclient</artifactId>
-			<version>4.3.3</version>
-		</dependency>
-		<dependency>
-			<groupId>org.apache.httpcomponents</groupId>
-			<artifactId>httpcore</artifactId>
-			<version>4.3.2</version>
-		</dependency>
-		
-		<!-- Security -->
-		<dependency>
-			<groupId>org.springframework.security</groupId>
-			<artifactId>spring-security-core</artifactId>
-			<version>${org.springsecurity-version}</version>
-		</dependency>
-		<dependency>
-			<groupId>org.springframework.security</groupId>
-			<artifactId>spring-security-web</artifactId>
-			<version>${org.springsecurity-version}</version>
-		</dependency>
-		<dependency>
-			<groupId>org.springframework.security</groupId>
-			<artifactId>spring-security-config</artifactId>
-			<version>${org.springsecurity-version}</version>
-		</dependency>
-		
-		<dependency>
-			<groupId>eu.dariah.de</groupId>
-			<artifactId>dariahsp-core</artifactId>
-			<version>${eu.dariah.de.dariahsp-version}</version>
-		</dependency>
-		
-		<!-- <dependency>
-			<groupId>de.dariah</groupId>
-			<artifactId>dariah-javasp-core</artifactId>
-			<version>0.0.3-SNAPSHOT</version>
-		</dependency>
-		<dependency>
-			<groupId>de.dariah</groupId>
-			<artifactId>dariah-javasp-web</artifactId>
-			<version>0.0.3-SNAPSHOT</version>
-		</dependency>
-		<dependency>
-			<groupId>de.dariah</groupId>
-			<artifactId>spring-security-saml2-core</artifactId>
-			<version>0.0.3-SNAPSHOT</version>
-		</dependency> -->
-		
-		<!-- Persistence -->
-		<dependency>
-			<groupId>org.springframework.data</groupId>
-			<artifactId>spring-data-mongodb</artifactId>
-			<version>1.10.6.RELEASE</version>
-		</dependency>
-		<dependency>
-		    <groupId>org.mongodb</groupId>
-		    <artifactId>mongo-java-driver</artifactId>
-		    <version>3.4.2</version>
-		</dependency>
-		
-		<!-- Model validation -->
-		<dependency>
-			<groupId>org.hibernate</groupId>
-			<artifactId>hibernate-validator</artifactId>
-			<version>5.2.2.Final</version>
-		</dependency>
-
-		<!-- XML Schema processing -->
-		<dependency>
-			<groupId>xerces</groupId>
-			<artifactId>xercesImpl</artifactId>
-			<version>2.12.0</version>
-		</dependency>
-
-		<!-- Tiles -->
-		<dependency>
-			<groupId>org.apache.tiles</groupId>
-			<artifactId>tiles-core</artifactId>
-			<version>${org.apache.tiles-version}</version>
-		</dependency>
-		<dependency>
-			<groupId>org.apache.tiles</groupId>
-			<artifactId>tiles-jsp</artifactId>
-			<version>${org.apache.tiles-version}</version>
-		</dependency>
-		<dependency>
-			<groupId>org.apache.tiles</groupId>
-			<artifactId>tiles-api</artifactId>
-			<version>${org.apache.tiles-version}</version>
-		</dependency>
-		
-
-		<!-- Logging -->
-		<dependency>
-			<groupId>org.slf4j</groupId>
-			<artifactId>slf4j-api</artifactId>
-			<version>${org.slf4j-version}</version>
-		</dependency>
-		<dependency>
-			<groupId>org.slf4j</groupId>
-			<artifactId>jcl-over-slf4j</artifactId>
-			<version>${org.slf4j-version}</version>
-			<scope>runtime</scope>
-		</dependency>
-		<dependency>
-			<groupId>org.slf4j</groupId>
-			<artifactId>log4j-over-slf4j</artifactId>
-			<version>${org.slf4j-version}</version>
-			<scope>runtime</scope>
-		</dependency>
-		<dependency>
-			<groupId>ch.qos.logback</groupId>
-			<artifactId>logback-core</artifactId>
-			<version>${ch.qos.logback.version}</version>
-		</dependency>
-		<dependency>
-			<groupId>ch.qos.logback</groupId>
-			<artifactId>logback-classic</artifactId>
-			<version>${ch.qos.logback.version}</version>
-		</dependency>
-			
-
-		<dependency>
-			<groupId>javax.servlet</groupId>
-			<artifactId>jstl</artifactId>
-			<version>1.2</version>
-		</dependency>
-		<dependency>
-			<groupId>javax.servlet</groupId>
-			<artifactId>javax.servlet-api</artifactId>
-			<version>3.1.0</version>
-			<scope>provided</scope>
-		</dependency>
-		<dependency>
-		<groupId>javax.servlet.jsp</groupId>
-			<artifactId>jsp-api</artifactId>
-			<version>2.2</version>
-			<scope>provided</scope>
-		</dependency>
-		
-		<dependency>
-		    <groupId>com.fasterxml.jackson.core</groupId>
-		    <artifactId>jackson-databind</artifactId>
-		    <version>${com.fasterxml.jackson-version}</version>
-		</dependency>
-		<dependency>
-			<groupId>com.fasterxml.jackson.datatype</groupId>
-			<artifactId>jackson-datatype-joda</artifactId>
-			<version>${com.fasterxml.jackson-version}</version>
-		</dependency>  
-		<dependency>
-		    <groupId>com.fasterxml.jackson.core</groupId>
-		    <artifactId>jackson-annotations</artifactId>
-		    <version>${com.fasterxml.jackson-version}</version>
-		</dependency>
-
-		<dependency>
-			<groupId>commons-fileupload</groupId>
-			<artifactId>commons-fileupload</artifactId>
-			<version>1.3.1</version>
-		</dependency>
-		
-		<!-- Joda Time -->
-		<dependency>
-			<groupId>joda-time</groupId>
-			<artifactId>joda-time</artifactId>
-			<version>2.8.2</version>
-		</dependency>
-		<dependency>
-			<groupId>joda-time</groupId>
-			<artifactId>joda-time-jsptags</artifactId>
-			<version>1.1.1</version>
-		</dependency>
-
-		
-		<!-- Test -->
-		<dependency>
-			<groupId>org.springframework</groupId>
-			<artifactId>spring-test</artifactId>
-			<version>${org.springframework-version}</version>
-			<scope>test</scope>
-		</dependency>
-		<dependency>
-			<groupId>junit</groupId>
-			<artifactId>junit</artifactId>
-			<version>4.12</version>
-			<scope>test</scope>
-		</dependency>
-		<dependency>
-			<groupId>org.mockito</groupId>
-			<artifactId>mockito-all</artifactId>
-			<version>1.10.19</version>
-			<scope>test</scope>
-		</dependency>
-		<!-- <dependency>
-			<groupId>com.lordofthejars</groupId>
-			<artifactId>nosqlunit-mongodb</artifactId>
-			<version>0.8.1</version>
-		</dependency> -->
-		
-	</dependencies>
-
-  <repositories>
-	<repository>
-		<id>central</id>
-		<url>https://nexus.winseda.de/repository/winseda-maven-central//</url>
-	</repository>
-  </repositories>
-
-<dependencyManagement>
-  	<dependencies>
-  		<dependency>
-  			<groupId>org.opensaml</groupId>
-  			<artifactId>xmltooling</artifactId>
-  			<version>1.4.4</version>
-  		</dependency>
-  	</dependencies>
-  </dependencyManagement>
-
-  <distributionManagement>
-	<repository>
-		<id>winseda-maven-releases</id>
-		<url>https://nexus.winseda.de/repository/winseda-maven-releases/</url>
-	</repository>
-	<snapshotRepository>
-		<id>winseda-maven-snapshots</id>
-		<url>https://nexus.winseda.de/repository/winseda-maven-snapshots/</url>
-	</snapshotRepository>
-  </distributionManagement>
-  
-	<build>
-		<pluginManagement>
-			<plugins>
-				<plugin>
-					<groupId>org.eclipse.m2e</groupId>
-					<artifactId>lifecycle-mapping</artifactId>
-					<version>1.0.0</version>
-					<configuration>
-						<lifecycleMappingMetadata>
-							<pluginExecutions>
-								<pluginExecution>
-									<pluginExecutionFilter>
-										<groupId>net.alchim31.maven</groupId>
-										<artifactId>yuicompressor-maven-plugin</artifactId>
-										<versionRange>[1.0.0,)</versionRange>
-										<goals>
-											<goal>compress</goal>
-										</goals>
-									</pluginExecutionFilter>
-									<action>
-										<execute>
-											<runOnIncremental>false</runOnIncremental>
-										</execute>
-									</action>
-								</pluginExecution>
-							</pluginExecutions>
-						</lifecycleMappingMetadata>
-					</configuration>
-				</plugin>
-			</plugins>
-		</pluginManagement>
-		<plugins>
-			<plugin>
-				<groupId>net.alchim31.maven</groupId>
-				<artifactId>yuicompressor-maven-plugin</artifactId>
-				<version>1.5.1</version>
-				<executions>
-					<execution>
-						<goals>
-							<goal>compress</goal>
-						</goals>
-					</execution>
-				</executions>
-				<configuration>
-					<nosuffix>true</nosuffix>
-					<webappDirectory>${project.build.directory}/min</webappDirectory>
-					<excludes>
-			            <exclude>**/*.min.js</exclude>
-			        </excludes>
-				</configuration>
-			</plugin>
-			<plugin>
-				<artifactId>maven-war-plugin</artifactId>
-				<configuration>
-					<webResources>
-						<resource>
-							<directory>${project.build.directory}/min</directory>
-						</resource>
-					</webResources>
-				</configuration>
-			</plugin>
-		</plugins>
-	</build>
-	
-	<profiles>
-		<profile>
-			<id>dariah.deb</id>
-			<build>
-				<plugins>
-					<plugin>
-						<artifactId>jdeb</artifactId>
-						<groupId>org.vafer</groupId>
-						<version>1.7</version>
-						<executions>
-							<execution>
-								<phase>package</phase>
-								<goals>
-									<goal>jdeb</goal>
-								</goals>
-								<configuration>
-									<snapshotExpand>true</snapshotExpand>
-									<dataSet>
-									  <data>
-									    <type>directory</type>
-									    <includes/>
-									    <src>${project.build.directory}/${project.build.finalName}</src>
-									    <mapper>
-									      <type>perm</type>
-									      <prefix>/var/dfa/webapps/${project.artifactId}</prefix>
-									      <user>root</user>
-									      <group>tomcat</group>
-									      <filemode>755</filemode>
-									    </mapper>
-									  </data>
-									</dataSet>
-								</configuration>
-							</execution>
-						</executions>
-					</plugin>
-				</plugins>
-			</build>
-		</profile>
-	</profiles>
-</project>

settings.gradle

+rootProject.name = 'dme'
+
+include(':dme-docs')
+project(':dme-docs').projectDir = new File('./docs')
\ No newline at end of file

src/main/java/de/unibamberg/minf/dme/controller/exceptions/ControllerExceptionHandler.java

 package de.unibamberg.minf.dme.controller.exceptions;
 
-import javax.activity.InvalidActivityException;
 import javax.servlet.http.HttpServletRequest;
 
 import org.slf4j.Logger;
@@ -24,10 +23,6 @@ public class ControllerExceptionHandler {
 	public static final String DEFAULT_ERROR_VIEW = "error";
 
 	@ResponseStatus(HttpStatus.CONFLICT)  // 409
-    @ExceptionHandler(InvalidActivityException.class)
-    public void handleConflict() {
-        // Nothing to do, just to show how individual errors could be handled
-    }
 	
 	@ExceptionHandler(value = Exception.class)
 	public Object defaultErrorHandler(HttpServletRequest req, Exception e) throws Exception {

src/main/java/de/unibamberg/minf/dme/controller/exceptions/ExceptionController.java

@@ -24,9 +24,9 @@ import de.unibamberg.minf.core.web.pojo.ModelActionPojo;
  * @author tobias
  * 
  * Requires web.xml adaption:
- *	<error-page>
- *		<location>/errors</location>
- *	</error-page>
+ *	&lt;error-page&gt;
+ *		&lt;location&gt;/errors&lt;/location&gt;
+ *	&lt;/error-page&gt;
  *
  */
 @Controller

src/main/java/de/unibamberg/minf/dme/dao/interfaces/ReferenceDao.java

@@ -15,6 +15,8 @@ public interface ReferenceDao extends BaseDao<Reference> {
 	 * the values contain the removable IDs.
 	 * 
 	 * @param referenceMap - A map with class names as keys and reference arrays as values
+	 * @param userId - Identifier of the user
+	 * @param sessionId - Identifier of the user's current session
 	 * @throws IllegalArgumentException Thrown if any of the specified references has an invalid ID
 	 * @throws ClassNotFoundException Thrown if a key specifies a class name that cannot be found by the current classloader 
 	 */